Stable isotope proxies for evaluating biodiversity in stream biota

Differences in δ¹³C and δ¹⁵N values in stream biota are caused by several environmental conditions. Variations in abundance, species richness and the assemblage structure of stream biota are also caused by several environmental conditions. Hence, abundance, species richness and the assemblage structure of stream biota are expected to be strongly correlated with the differences in value of stable isotopes. In this study, the gaps in δ¹³C and δ¹⁵N between periphyton and charr are discussed in terms of the abundance, genus richness, and assemblage of benthic invertebrates at each site. Gaps in δ¹³C between periphyton and charr were strongly correlated with some aspects of mountainous area and the genus richness of benthic invertebrates at each site. The gaps in δ¹⁵N between periphyton and charr were strongly correlated with the abundance and assemblage structure of benthic invertebrates at the location tested. The δ¹³C values of predators were correlated with some aspects of mountainous area and the assemblage structure of the benthic invertebrates. The δ¹⁵N values of predators were correlated with genus richness and the assemblage structure of the benthic invertebrates. These results suggest that the value gaps in δ¹³C and δ¹⁵N can be used to assess biodiversity and could provide indices for estimating the biodiversity in a stream.     

Two new flavonoids from Derris laxiflora Benth

Two new compounds, derriscoumaronochromone (1) and cis-3,4′-dihydroxy- 5,7-dimethoxyflavan (2), as well as trans-4'-O-methylcatechin (3) were isolated from Derris laxiflora, The structures of these compounds were determined by analysis of their spectroscopic data.     

Endophytic fungi in forest trees: are they mutualists?

Forest trees form symbiotic associations with endophytic fungi which live inside healthy tissues as quiescent microthalli. All forest trees in temperate zones host endophytic fungi. The species diversity of endophyte communities can be high. Some tree species host more than 100 species in one tissue type, but communities are usually dominated by a few host-specific species. The endophyte communities in angiosperms are frequently dominated by species of Diaporthales and those in gymnosperms by species of Helotiales. Divergence of angiosperms and gymnosperms coincides with the divergence of the Diaporthales and the Helotiales in the late Carboniferous about 300 million years (Ma) ago, indicating that the Diaporthalean and Helotialean ancestors of tree endophytes had been associated, respectively, with angiosperms and gymnosperms since ≥300 Ma. Consequently, dominant tree endophytes have been evolving with their hosts for millions of years. High virulence of such endophytes can be excluded. Some are, however, opportunists and can cause disease after the host has been weakened by some other factor. Mutualism of tree endophytes is often assumed, but evidence is mostly circumstantial. The sheer impossibility of producing endophyte-free control trees impedes proof of mutualism. Some tree endophytes exhibit either a pathogenic or a putatively mutualistic behaviour depending on the situation. The lifestyle (mutualism, commensalism, parasitism) of most tree endophytes is, however, not known. They are just there in the tissue and resume growth at the onset of natural senescence of the host tissue on which they eventually sporulate. Density of colonization of conifer needles by endophytes increases with needle age. It is postulated that the needles die as soon as colonization density reaches a threshold value. Normally, the threshold is not reached before the onset of natural senescence. The threshold value may, however, be reached earlier under some adverse conditions, e.g. lack of light in dense stands. As a consequence, endophytes kill the needles prematurely. Needle endophytes could, thus, be useful to eliminate “parasitic” needle mass, i.e. needles which consume more than they produce.     

Evaluation of chromium phytoremediation potential of some plant species of Dir Lower,Khyber Pakhtunkhwa,Pakistan

Chromium is the second most common metal pollutant in the soil, sediments and groundwater, due to its extensive industrial application, hence posing a serious environmental concern. Various remediation approaches including phytoremediation have been proposed to remediate chromium polluted waters and soils. In the present research, a total of sixty-one plant species belongs to thirty families were analyzed for the concentration of Chromium. Chromium was analyzed in the soil of the root zone, root and shoot of each plant. The concentration of chromium in the soil of different sites and plant parts (roots and shoots) was found in mg/kg in the range of 0.33–48.73, 8–1233.3 and 10.23–568.33 respectively. The highest concentration of chromium was found in the soil of site Site 41 (48.73 mg/kg) followed by Site 18 (47.83 mg/kg) and Site 6 (45.33 mg/kg). Among the analyzed plants, the highest concentration of chromium in mg/kg was found in the root of Cannabis sativa (1233.3) while its highest concentration was found in the shoot of Allium griffithianum (568.33). Phytoremediation potential of the analyzed plants was evaluated by the calculation of Bioconcentration Factor (BCF), Translocation Factor (TF) and Biological Accumulation Coefficient (BAC). Thirty-eight plant species showed feasibility for the phytostabilization of chromium (Cr_Excluders) based on BCF value and the concentration of chromium in the root. Plants i.e. Argyrolobium stenophyllum, Silybum marianum, Bryophyllum daigremontianum, Limonium macrorhabdon, Calendula arvensis and Delphinium suave were found the most efficient plant for the phytostabilization of chromium. Fifteen plant species showed feasibility for the phytoextraction of chromium (Cr_Indicators) based on TF value. The most efficient plant's species among them for the phytoextraction of chromium are Rosularia adenotricha, Catharanthus roseus, Allium griffithianum, Himalaiella heteromalla, Stellaria media, Salvia moorcroftiana and Marrubium vulgare. Based on BCFs, TFs and BACs value and the concentration of chromium in plant shoot six plant species Allium griffithianum, Catharanthus roseus, Himalaiella heteromalla, Geranium rotundifolium, Marrubium vulgare and Solanum nigrum were found chromium hyperaccumulators.     

Treatment with pioglitazone is associated with decreased preprandial ghrelin levels: A randomized clinical trial

The effects of metformin and pioglitazone on ghrelin, a physiologic regulator of appetite and food intake, have not been clearly established. In a randomized clinical trial, we randomly assigned 60 type 2 diabetic patients to either metformin (Group A; n = 30) or pioglitazone (Group B; n = 30) treatment groups. The groups were similar in their baseline characteristics. A standard fasting 75 g oral glucose tolerance test was performed at time zero before starting metformin or pioglitazone, and 3 months later. After 3 months of treatment, pioglitazone, but not metformin, was significantly associated with weight gain. Both groups experienced a significant reduction in fasting plasma glucose (p < 0.01), hemoglobin A1c (p < 0.01 in Group A and p < 0.05 in Group B), and insulin resistance (p < 0.01). The effect of metformin on preprandial ghrelin and its response to glucose challenge was not significant, while the pioglitazone group had a significant reduction in preprandial ghrelin levels after treatment (p < 0.05). The effect of pioglitazone on ghrelin was independent of changes in body weight, body mass index, glucose control, insulin resistance, and plasma insulin. In conclusion, treatment with pioglitazone is associated with a decrease in preprandial ghrelin levels and therefore, the weight gain and increased food intake related to pioglitazone use cannot be explained by its effects on ghrelin. The effect of pioglitazone on ghrelin is independent of changes in body weight, body mass index, plasma insulin, insulin resistance, or glucose control.     

Variation of Pleurotus ostreatus (Jacq. Ex Fr.) P. Kumm. (1871) performance subjected to differentdoses and timings of nano-urea

Supplementation of the growing substrate by nitrogenous additives has been known to improve the production of oyster mushroom (Pleurotus ostreatus (Jacq. ex Fr.) P. Kumm. (1871)). However, the application of nano-additives has not been reported in such cultivation yet. The study investigated the effect of nano-urea added in two different doses (3 g and 5 g per kg substrate), once (at spawning or after first flush) or twice (at spawning and after first flush) to the growing substrate consisting of wheat straw and spent oyster substrate (1:1, w/w). Results showed that the application of nano-urea once has induced the highest number of mushroom flushes (four flushes) despite the dose applied. Contrarily to early findings, where high doses of nitrogen have caused inhibition of mushroom growth and production, nano-urea application has had better effects when applied twice. With 5 g/kg, it induced the shortest period between the first and the third flush (15 days). With 3 g/kg, it resulted in the highest biological and economic yields at the third flush (332.7 g/bag and 283.1 g/bag respectively), in total (973.4 g/bag and 854.0 g/bag respectively), the highest biological efficiency (109.6%), and pileus diameter/stipe length ratio (2.8). Experimental findings of the current study may be potentially applied at commercial scale.     

Novel Single-step Pretreatment of Steam Explosion and Choline Chloride to De-lignify Corn Stover for Enhancing Enzymatic Edibility

It is important to develop efficient and economically feasible pretreatment methods for lignocellulosic biomass, to increase annual biomass production. A number of pretreatment methods were introduced to promote subsequent enzymatic hydrolysis of biomass for green energy processes. Pretreatment with steam explosion removes the only xylan at high severity but increases lignin content. In this study, corn stover soaked in choline chloride solution before the steam explosion is economically feasible as it reduced cost. Enzymatic hydrolysis of de-lignified corn stover is enhanced by combinatorial pretreatments of steam explosion and choline chloride. Corn stover pretreated with choline chloride at the ratio of 1:2.2 (w/w), 1.0 MPa, 184 °C, for 15 min efficiently expelled 84.7% lignin and 78.9% xylan. The residual solid comprised of 74.59% glucan and 7.51% xylan was changed to 84.2% glucose and 78.3% xylose with enzyme stacking of 10FPU/g. This single-step pretreatment had ∼ 4.5 and 6.4 times higher glucose yield than SE-pretreated and untreated corn stover, respectively. Furthermore, SEM, XRD and FTIR indicated the porosity, crystalline changes, methoxy bond-cleavage respectively due to the lignin and hemicellulose expulsion. Thus, the released acetic acid during this process introduced this novel strategy, which significantly builds the viability of biomass in short pretreatment time.     

Engineered heterologous FPP synthases-mediated Z,E-FPP synthesis in E. coli

Production of Z-type farnesyl diphosphate (FPP) has not been reported in Escherichia coli. Here we present the fusion enzyme (ILRv) of E. coli E,E-FPP synthase (IspA) and Mycobacterium tuberculosis Z,E-FPP synthase (Rv1086), which can produce primarily Z,E-FPP rather than E,E-FPP, the predominant stereoisomer found in most organisms. Z,E-farnesol (FOH) was produced from E. coli harboring the bottom portion of the MVA pathway and the fusion FPP synthase (ILRv) at a titer of 115.6 mg/L in 2 YT medium containing 1% (v/v) glycerol as a carbon source and 5 mM mevalonate. The Z,E-FOH production was improved by 15-fold, compared with 7.7 mg/L obtained from the co-overexpression of separate IspA and Rv1086. The Z,E-FPP was not metabolized in native metabolic pathways of E. coli. It would be of interest to produce Z,E-FPP derived sesquiterpenes from recombinant E. coli due to no loss of Z,E-FPP substrate in endogenous metabolism of the host strain.     

Guilds of mycorrhizal fungi and their relation to trees,ericads, orchids and liverworts in a neotropical mountain rain forest

Mycorrhizas of vascular plants and mycorrhiza-like associations of liverworts and hornworts are integral parts of terrestrial ecosystems, but have rarely been studied in tropical mountain rain forests. The tropical mountain rain forest area of the Reserva Biológica San Francisco in South Ecuador situated on the eastern slope of the Cordillera El Consuelo is exceptionally rich in tree species, ericads and orchids, but also in liverworts. Previous light and electron microscopical studies revealed that tree roots are well colonized by structurally diverse Glomeromycota, and that epiphytic, pleurothallid orchids form mycorrhizas with members of the Tulasnellales and the Sebacinales (Basidiomycota). Sebacinales also occurred in mycorrhizas of hemiepiphytic ericads and Tulasnellales were found in liverworts belonging to the Aneuraceae. On the basis of these findings, we hypothesized that symbiotic fungi with a broad host range created shared guilds or even fungal networks between different plant species and plant families. To test this hypothesis, molecular phylogenetic studies of the fungi associated with roots and thalli were carried out using sequences of the nuclear rDNA coding for the small subunit rRNA (nucSSU) of Glomeromycota and the large subunit rRNA (nucLSU) of Basidiomycota. Sequence analyses showed that Sebacinales and Tulasnellales were only shared within but not between ericads and orchids or between liverworts and orchids, respectively. Regarding arbuscular-mycorrhiza-forming trees, however, 18 out of 33 Glomus sequence types were shared by two to four tree species belonging to distinct families. Nearly all investigated trees shared one sequence type with another tree individual. Host range and potential shared guilds appeared to be restricted to the plant family level for Basidiomycota, but were covering diverse plant families in case of Glomeromycota. Given that the sequence types as defined here correspond to fungal species, our findings indicate potential fungal networks between trees.